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A quick overview of features

API changes

Here we provide information about functions or classes that have been removed, renamed or are deprecated (not recommended) during different release circles.

Dipy 0.8 Changes

Peaks

The module peaks is now available from dipy.direction and it can still be accessed from dipy.reconst but it will be completelly removed in version 0.10.

Resample

The function resample from dipy.align.aniso2iso is deprecated. Please, use instead reslice from dipy.align.reslice. The module aniso2iso will be completely removed in version 0.10.

Changes between 0.7.1 and 0.6

Peaks_from_model

The function peaks_from_model is now available from dipy.reconst.peaks . Please replace all imports like

from dipy.reconst.odf import peaks_from_model

with

from dipy.reconst.peaks import peaks_from_model

Target

The function target from dipy.tracking.utils now takes an affine transform instead of a voxel sizes array. Please update all code using target in a way similar to this

img = nib.load(anat)
voxel_dim = img.get_header()['pixdim'][1:4]
streamlines = utils.target(streamlines, img.get_data(), voxel_dim)

to something similar to

img = nib.load(anat)
streamlines = utils.target(streamlines, img.get_data(), img.get_affine())